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The Duplicate Original Folder Paths Inside Quarantine Folder Location setting allows Identity Finder to automatically create a set of structured paths matching that of the original file location in the quarantined target location. For example if you are quarantining c:\folder1\subfolder2\file.txt to z:\secure then this setting will quarantine the file.txt to z:\secure\machinename\sC_Drive\folder1\subfolder2\file.txt.
To view or modify this setting, click the Configuration ribbon, then the Settings button. For additional settings please refer to Change the Behavior of the Actions Used to Protect Identities or Settings to Customize Your Experience.